蛋白质组学

加拿大生物信息学会蛋白组学系列讲座讲义

这是加拿大生物信息学会举办的蛋白组学workshop的讲义ppt
一共为期5天,因为空间有限的问题我将分批贴出供大家下载,请尽快下载。
注意这个空间的带宽为每月1GB,所以请尽量不要重复下载以给更多朋友机会。这是国外空间,教育网内朋友请用代理服务器。如果哪位有好的空间,请PM我,多谢。

第一天
Topic : 2DGE
Speaker:
David Wishart
Professor
Department of Computing Science and Biological Sciences
University of Alberta, Edmonton, Alberta T6G 2E8
Office: 341 Athabasca Hall
Phone: (780) 492-0383, Fax: (780) 492-1071
WWW: http://www.pharmacy.ualberta.ca/wishart.html

B.Sc. (Honours, First Class) Physics, University of Alberta, 1983
M.Phil. Molecular Biophysics & Biochemistry, Yale University, 1986
Ph.D. Molecular Biophysics & Biochemistry, Yale University, 1991

Bioinformatics, simulations, computational biology, structural biology
Dr. Wishart?s formal training is in physics, biochemistry, biophysics, pharmaceutical science and computational biology. His research interests lie in 1) the development of novel bioinformatics software, databases and algorithms, 2) the modelling of biological systems, 3) structural biology and structure-based drug design and 4) the application of NMR spectroscopy to drug discovery and metabolic profiling. He is currently supervising 12 students and post-doctoral fellows. Since 1990 he has published more than 65 papers on a variety of topics ranging from general sequence analysis, gene finding, protein annotation, protein structure analysis, metabolomics, structural proteomics, and NMR spectroscopy. Dr. Wishart also supervises and manages the bioinformatics core facilities for 1) the Alberta Cancer Board, 2) the Protein Engineering Network of Centres of Excellence, and 3) the Genome Canada Bioinformatics Help Desk.

1. High Throughput Methods in Proteomics
http://coolpizza3.freeserverhost.com/1.1.ppt
2. 2D Gel Analysis
http://coolpizza3.freeserverhost.com/1.3.ppt
3. GelScape and GelBank
http://coolpizza3.freeserverhost.com/1.4.ppt

【新增第二日】
Topic: Mass Spectrometry
Speaker: David Wishart
Gary Van Domselaar
1. Mass Spectrometry: Methods & Theory
http://coolpizza3.freeserverhost.com/2.1.ppt
2. Mass Spectrometry: Applications to Proteomics
http://coolpizza3.freeserverhost.com/2.2.ppt
3. MS-MS: Applications to Proteomics
http://coolpizza3.freeserverhost.com/2.3.ppt
4.Peptide Mass Fingerprinting and MS/MS Fragment Ion analysis with MASCOT
http://coolpizza3.freeserverhost.com/2.4.ppt

【新增第三日】

Topic : Protein Structures
Speaker: David Wishart
1. Methods in 3D Structure Determination
http://coolpizza4.hollosite.com/3.1.ppt
2. Homology Modelling
http://coolpizza4.hollosite.com/3.2.ppt
3. Predicting and Classifying Protein Structures
http://coolpizza4.hollosite.com/3.3.ppt
Speaker: Gary Van Domselaar
4. Structure Tools and Visualization
http://coolpizza4.hollosite.com/3.4.ppt
5. Superposition & Threading
http://coolpizza4.hollosite.com/3.5.ppt

【新增第四日】

Topic: Protein Interactions
Speaker:
1. Michel Dumontier
Blueprint Initiative
mjdumont@blueprint.org
http://blueprint.org

Protein Interactions
http://coolpizza5.hollosite.com/4.1.ppt

2. Shan Sundararaj
University of Alberta
Edmonton, AB
ss23@ualberta.ca

Protein Pathways and Pathway Databases
http://coolpizza5.hollosite.com/4.3.ppt

【新增第五日】

Topic: RNAi
Speaker: Stephanie Minnema
Department of Biochemistry and Molecular Biology
and Southern Alberta Cancer Research Centre
University of Calgary
3330 Hospital Drive N.W.
Calgary, Alberta
T2N 4N1, Canada
http://coolpizza5.hollosite.com/5.3.ppt

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